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A community effort to assess and improve drug sensitivity prediction algorithms

James C Costello 1 Laura M Heiser Elisabeth Georgii Mehmet Gönen Michael P Menden Nicholas J Wang Mukesh Bansal Muhammad Ammad-Ud-Din Petteri Hintsanen Suleiman A Khan John-Patrick Mpindi Olli Kallioniemi Antti Honkela 2 Tero Aittokallio Krister Wennerberg Jean-Paul Abbuehl Jeffrey Allen 3 Russ B Altman 4 Shawn Balcome Alexis Battle Andreas Bender 5 Bonnie Berger Jonathan Bernard Madhuchhanda Bhattacharjee 6 Krithika Bhuvaneshwar Andrew A Bieberich Fred Boehm Andrea Califano Christina Chan 7 Beibei Chen 8 Ting-Huei Chen 9 Jaejoon Choi Luis Pedro Coelho 10 Thomas Cokelaer 11 James C Collins Chad J Creighton Jike Cui 12 Will Dampier V Jo Davisson Bernard De Baets Raamesh Deshpande Barbara Dicamillo Murat Dundar 13 Zhana Duren Adam Ertel Haoyang Fan 14 Hongbin Fang 15 Dan Gallahan Robinder Gauba Assaf Gottlieb Michael Grau Joe W Gray 16 Yuriy Gusev Min Jin Ha 17 Leng Han Michael Harris Nicholas Henderson 18 Hussein A Hejase Krisztian Homicsko Jack P Hou Woochang Hwang Adriaan P Ijzerman 19 Bilge Karacali Samuel Kaski Sunduz Keles Christina Kendziorski Junho Kim 20 Min Kim 21 Youngchul Kim David A Knowles Daphne Koller 22 Junehawk Lee Jae K Lee Eelke B Lenselink 23 Biao Li 24 Bin Li 24 Jun Li Han Liang 25 Jian Ma Subha Madhavan Sean Mooney 26 Chad L Myers 27 Michael A Newton John P Overington Ranadip Pal Jian Peng 28 Richard Pestell 29 Robert J Prill Peng Qiu Bartek Rajwa Anguraj Sadanandam Julio Saez-Rodriguez 11 Francesco Sambo Hyunjin Shin 30 Dinah Singer Jiuzhou Song Lei Song 31 Arvind Sridhar Michiel Stock Gustavo Stolovitzky Wei Sun 32 Tram Ta Mahlet Tadesse 33 Ming Tan Hao Tang Dan Theodorescu Gianna Maria Toffolo Aydin Tozeren William Trepicchio Nelle Varoquaux 34, 35 Jean-Philippe Vert 34, 35 Willem Waegeman Thomas Walter 34, 35 Qian Wan Difei Wang Wen Wang 36 Yong Wang Zhishi Wang 37 Joerg K Wegner Tongtong Wu 38 Tian Xia 39 Guanghua Xiao 40 Yang Xie Yanxun Xu 41 Jichen Yang Yuan Yuan Shihua Zhang 42 Xiang-Sun Zhang 43 Junfei Zhao 44 Chandler Zuo 45 Herman W T Van Vlijmen Gerard J P Van Westen James J Collins
1 National Centre for Plasma Science and Technology (NCPST)
2 HIIT - Helsinki Institute for Information Technology
3 UOW - University of Westminster [London]
4 BMIR - Stanford Center for BioMedical Informatics Research
5 DSTO
6 NEMESIS-CRICM - Equipe NEMESIS - Centre de Recherches de l'Institut du Cerveau et de la Moelle épinière
CRICM - Centre de Recherche de l'Institut du Cerveau et de la Moelle épinière
7 Institute for Molecular Bioscience, and ARC Centre of Excellence in Bioinformatics, The University of Queensland, Brisbane, QLD 4072
8 NUIST - Nanjing University of Information Science and Technology
9 Department of Physics [Stockholm]
10 INESC - Instituto de Engenharia de Sistemas e Computadores
11 EMBL-EBI - European Bioinformatics Institute [Hinxton]
12 Department of Agronomy
13 Medicine Faculty
14 Faculty of anima Medicine l
15 Oxford e-Research Centre [Oxford]
16 Department of Computer Science [Alabama]
17 Roberval - Roberval
18 Centre for Inflammation Research
19 Division of Medicinal Chemistry
20 PITT - University of Pittsburgh
21 Department of Chemistry and Nano Science
22 Institute of Materials Chemistry
23 Division of Medicinal Chemistry
24 Peking Univ, Coll Urban & Environm Sci, Lab Earth Surface Proc, Beijing 100871, Peoples R China
25 Queensland Research Lab
26 CPIB - Centre for Plant Integrative Biology [Nothingham]
27 Department of Electrical and Computer Engineering
28 SUN Yatsen University
29 Sidney Kimmel Cancer Center
30 Molecular Carcinogenesis [Sutton]
31 Innovation Center for Biomedical Informatics
32 University of Leeds
33 Dipartimento di Chimica
34 Cancer et génome: Bioinformatique, biostatistiques et épidémiologie d'un système complexe
35 CBIO - Centre de Bioinformatique
36 Computer Graphics Group [Hong Kong]
Department of Computer Science [Hong Kong]
37 Department of Computing [London]
38 State Key Laboratory of Virology
39 MoNOS, Huygens Laboratory
40 IMP - Institute of Modern Physics, Chinese Academy of Sciences, Lanzhou 730000, China
41 USTB - University of Science and Technology Beijing [Beijing]
42 Dalian University of Technology
43 Chalmers University of Technology [Göteborg]
44 APS - Advanced Photon Source [ANL]
45 Beth Israel Deaconess Medical Center
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https://hal-mines-paristech.archives-ouvertes.fr/hal-01101874
Contributor : Jean-Philippe Vert <>
Submitted on : Saturday, January 10, 2015 - 12:47:44 AM
Last modification on : Monday, May 24, 2021 - 7:14:01 PM

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James C Costello, Laura M Heiser, Elisabeth Georgii, Mehmet Gönen, Michael P Menden, et al.. A community effort to assess and improve drug sensitivity prediction algorithms. Nature Biotechnology, Nature Publishing Group, 2014, 32, pp.1202-1212. ⟨10.1038/nbt.2877⟩. ⟨hal-01101874⟩

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